Hi, I want to generate KM plot (Kaplan Meier) Plot using Kaplan-Meier Plotter tool for 372 miRNAs. But here, We don't have a option for generating multiple plots at once. For the genes they have but not for miRNAs. Can you please help me to do so. It's for the TCGA breast cancer Datasets. The tool link is attached. submitted by /u/Academic_Ad8284 [visit reddit] [comments ..read more

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A new book by a UNT historian argues that American medicine overlooks how the ailments of many Black Americans are influenced by the diets of their African forebears. https://www.texasmonthly.com/news-politics/ancestral-genomics-geography-black-health-disparities/ submitted by /u/Texas_Monthly [visit reddit] [comments ..read more

submitted by /u/FullNegotiation2386 [visit reddit] [comments ..read more

I stumbled upon this captivating article exploring the revolutionary effects of genomics on personalised medicine. It thoroughly examines how our genetic information can be employed to customise medical therapies specifically tailored to individual genetic makeups, thus transforming healthcare. The article explores a wide range of topics, from the technological aspects of genomics to its practical implementations and potential future developments. I thought it could initiate some intriguing conversations here! You can find the full article here: Full Article submitted by /u/CatSewage [visit ..read more

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Hello everyone, I have a question: how can I distinguish or determine whether a genetic variant (f.e. WES) seen on IGV is heterozygous, mosaic, or a PCR duplicate? submitted by /u/ExtremeGenetics700 [visit reddit] [comments ..read more

Hi all, I am working on a gwas and I need some advice on early data qc and processing. I’m reading a lot but there is still some “experience gap in knowledge” - [advisors are not knowledgeable or helpful] The data from illumina is made up of 3 batches (there are some batch control duplicates included in 2 and 3). Each batch has multiple illumina reports GSGT files (as *.cvs.gz). 1) my plan is to convert the reports to a plink supported format, then merge them into 1 file for the batch. Is that the right approach? 2) next, I planned to do the QC on each batch, and impute each batch separately ..read more

Hello! This is (hopefully) a quick question, but as a non-bioinformatics person who just received g.vcf.gz.tbi files, how do you open them? I have no idea which program to use. Thanks! submitted by /u/GoodnightMoose [visit reddit] [comments ..read more

Hi! I'm a sophomore majoring in Microbiology at the moment. I'm enjoying it, but I've been thinking of a major at my school called Genomics and Molecular Genetics at my school. The reason I want to switch is because I recently picked up a minor in anthropology, which is a major interest of mine, and my dream is to work biological anthropology research, broadly. I'm going with the flow... currently I'm working in a mosquito research lab until I find a lab where I can shadow in biological anthropology. I do not wish to work in anything medical, and it seems like thats my only option if I stay i ..read more