A platform for distributed production of synthetic nitrated proteins in live bacteria
Nature Chemical Biology
by Neil D. Butler, Sabyasachi Sen, Lucas B. Brown, Minwei Lin, Aditya M. Kunjapur
1w ago
Nature Chemical Biology, Published online: 15 May 2023; doi:10.1038/s41589-023-01338-x A combination of enzyme discovery for nonheme diiron N-monooxygenases, metabolic engineering and genetic code expansion enables the construction of a live bacterial producer of synthetic nitrated proteins containing para-nitro-l-phenylalanine ..read more
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In-cell kinetic stability is an essential trait in metallo-β-lactamase evolution
Nature Chemical Biology
by Lisandro J. González, Guillermo Bahr, Mariano M. González, Robert A. Bonomo, Alejandro J. Vila
1w ago
Nature Chemical Biology, Published online: 15 May 2023; doi:10.1038/s41589-023-01319-0 Identification of the molecular features that define the kinetic stability of the clinically relevant NDM-1 metallo-β-lactamase in the bacterial periplasm links the cellular metabolism of this protein with its natural evolution ..read more
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Single-cell multi-omics in the medicinal plant Catharanthus roseus
Nature Chemical Biology
by Chenxin Li, Joshua C. Wood, Anh Hai Vu, John P. Hamilton, Carlos Eduardo Rodriguez Lopez, Richard M. E. Payne, Delia Ayled Serna Guerrero, Klaus Gase, Kotaro Yamamoto, Brieanne Vaillancourt, Lorenzo Caputi, Sarah E. O’Connor, C. Robin Buell
1w ago
Nature Chemical Biology, Published online: 15 May 2023; doi:10.1038/s41589-023-01327-0 The medicinal plant Catharanthus roseus is a source of leading anticancer drugs. The monoterpene indole alkaloid (MIA) biosynthetic pathway in C. roseus has now been analyzed using a complementary, multi-omics, single-cell approach. This identified clusters of genes involved in MIA biosynthesis and cell-type-specific partitioning in the MIA biosynthetic pathway ..read more
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In-cell protein stability promotes antimicrobial resistance of metallo-β-lactamases
Nature Chemical Biology
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1w ago
Nature Chemical Biology, Published online: 15 May 2023; doi:10.1038/s41589-023-01322-5 Protein stability is important for biological function, but little is known about in-cell stability. In the New Delhi metallo-β-lactamase NDM-1, enhancement of zinc binding or amino acid substitutions at the C terminus increase in-cell kinetic stability and prevent proteolysis. These findings link NDM-1-mediated resistance with its in-cell stability and physiology ..read more
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Signal peptide mimicry primes Sec61 for client-selective inhibition
Nature Chemical Biology
by Shahid Rehan, Dale Tranter, Phillip P. Sharp, Gregory B. Craven, Eric Lowe, Janet L. Anderl, Tony Muchamuel, Vahid Abrishami, Suvi Kuivanen, Nicole A. Wenzell, Andy Jennings, Chakrapani Kalyanaraman, Tomas Strandin, Matti Javanainen, Olli Vapalahti, Matthew P. Jacobson, Dustin McMinn, Christopher J. Kirk, Juha T. Huiskonen, Jack Taunton, Ville O. Paavilainen
1w ago
Nature Chemical Biology, Published online: 11 May 2023; doi:10.1038/s41589-023-01326-1 A selective inhibitor of Sec61 blocks protein entry into the secretory pathway and has therapeutic efficacy in rheumatoid arthritis. A cryo-EM structure of the inhibited Sec61 provides a model for client-selective protein translocation inhibition ..read more
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A common mechanism of Sec61 translocon inhibition by small molecules
Nature Chemical Biology
by Samuel Itskanov, Laurie Wang, Tina Junne, Rumi Sherriff, Li Xiao, Nicolas Blanchard, Wei Q. Shi, Craig Forsyth, Dominic Hoepfner, Martin Spiess, Eunyong Park
1w ago
Nature Chemical Biology, Published online: 11 May 2023; doi:10.1038/s41589-023-01337-y Itskanov and Wang et al. determined high-resolution structures of the human Sec61 channel inhibited by several structurally distinct small molecules and revealed the common inhibitor-binding site in Sec61 and molecular interactions in atomic detail ..read more
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Revealing the signaling of complement receptors C3aR and C5aR1 by anaphylatoxins
Nature Chemical Biology
by Yue Wang, Weiyi Liu, Youwei Xu, Xinheng He, Qingning Yuan, Ping Luo, Wenjia Fan, Jingpeng Zhu, Xinyue Zhang, Xi Cheng, Yi Jiang, H. Eric Xu, Youwen Zhuang
1w ago
Nature Chemical Biology, Published online: 11 May 2023; doi:10.1038/s41589-023-01339-w Cryo-EM structures of complement receptors C3aR and C5aR1 bound to their respective anaphylatoxin ligands C3a and C5a reveal insights into the conserved features and topological diversities of C3aR and C5aR1 in recognizing C3a and C5a ..read more
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Author Correction: Ancient defensive terpene biosynthetic gene clusters in the soft corals
Nature Chemical Biology
by Paul D. Scesa, Zhenjian Lin, Eric W. Schmidt
1w ago
Nature Chemical Biology, Published online: 11 May 2023; doi:10.1038/s41589-023-01352-z Author Correction: Ancient defensive terpene biosynthetic gene clusters in the soft corals ..read more
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Dissecting the conformational complexity and mechanism of a bacterial heme transporter
Nature Chemical Biology
by Di Wu, Ahmad R. Mehdipour, Franziska Finke, Hojjat G. Goojani, Roan R. Groh, Tamara N. Grund, Thomas M. B. Reichhart, Rita Zimmermann, Sonja Welsch, Dirk Bald, Mark Shepherd, Gerhard Hummer, Schara Safarian
1M ago
Nature Chemical Biology, Published online: 24 April 2023; doi:10.1038/s41589-023-01314-5 Characterization of the conformation landscape of the bacterial ABC transporter CydDC reveals that this heterodimeric protein complex is a long-sought heme transporter essential for the functional maturation of bd-type cytochromes ..read more
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Dynamic basis for dA•dGTP and dA•d8OGTP misincorporation via Hoogsteen base pairs
Nature Chemical Biology
by Stephanie Gu, Eric S. Szymanski, Atul K. Rangadurai, Honglue Shi, Bei Liu, Akanksha Manghrani, Hashim M. Al-Hashimi
1M ago
Nature Chemical Biology, Published online: 24 April 2023; doi:10.1038/s41589-023-01306-5 Replicative errors contribute to genetic diversity needed for evolution but in high frequency lead to genomic stability. Here, NMR is used to show via a kinetic model that DNA dynamics can determine the misincorporation of A•G and A•8OG mismatches ..read more
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